STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_0381Hypothetical protein; KEGG: swp:swp_0823 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase. (240 aa)    
Predicted Functional Partners:
Cthe_0380
Hypothetical protein; KEGG: pfh:PFHG_00634 conserved hypothetical protein.
  
    0.745
Cthe_0379
Hypothetical protein; KEGG: noc:Noc_2864 phospho-N-acetylmuramoyl-pentapeptide-transferase.
  
    0.475
Cthe_0378
KEGG: cpy:Cphy_3187 hypothetical protein.
       0.470
Cthe_0377
PFAM: peptidase M56 BlaR1; KEGG: dsy:DSY1087 hypothetical protein.
  
    0.468
Cthe_0376
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: dsy:DSY1088 hypothetical protein.
  
    0.463
Cthe_0382
KEGG: dhd:Dhaf_3803 protein of unknown function DUF214.
       0.423
Cthe_0940
KEGG: pfa:MAL3P6.22 hypothetical protein.
   
    0.412
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.