STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_0632Hypothetical protein; KEGG: esi:Exig_1766 glycosyl transferase family protein. (200 aa)    
Predicted Functional Partners:
Cthe_0633
KEGG: ddc:Dd586_1282 hypothetical protein.
  
    0.740
Cthe_3321
KEGG: kol:Kole_1147 hypothetical protein.
       0.627
Cthe_0630
Hypothetical protein; KEGG: atc:AGR_L_552 probable ABC transporter ATP-binding protein Y4GM.
       0.503
Cthe_0631
Hypothetical protein; KEGG: apa:APP7_0591 tight adherence protein C.
       0.503
Cthe_0629
PFAM: type II secretion system protein E; KEGG: chl:Chy400_0548 type II secretion system protein E.
       0.484
Cthe_0628
Hypothetical protein; KEGG: aau:AAur_3162 putative cell surface polysaccharide biosynthesis.
  
    0.479
Cthe_0627
Hypothetical protein; KEGG: csc:Csac_2625 SAF domain-containing protein.
       0.471
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.