STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_0793KEGG: cce:Ccel_0595 hypothetical protein. (422 aa)    
Predicted Functional Partners:
Cthe_1761
PFAM: protein of unknown function DUF214; KEGG: cce:Ccel_0469 protein of unknown function DUF214.
  
 
 0.880
Cthe_2123
PFAM: Trypanosome RHS; KEGG: cac:CAC0668 hypothetical protein.
  
 
 0.877
Cthe_1827
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase domain protein.
 
 
 0.870
Cthe_0239
PFAM: Spore coat protein CotH; Dockerin type 1; KEGG: amt:Amet_0190 spore coat protein CotH.
 
 
 0.798
Cthe_0790
PFAM: protein of unknown function YGGT; KEGG: cce:Ccel_0598 protein of unknown function YGGT.
 
    0.789
Cthe_1764
PFAM: outer membrane efflux protein; KEGG: outer membrane efflux protein.
  
 
 0.775
Cthe_1765
Hypothetical protein; KEGG: cce:Ccel_3396 outer membrane protein-like protein.
  
 
 0.774
Cthe_2160
PFAM: Spore coat protein CotH; KEGG: amt:Amet_0190 spore coat protein CotH.
  
 
 0.769
Cthe_1932
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0288 hypothetical protein.
  
     0.766
Cthe_0760
KEGG: cce:Ccel_0718 hypothetical protein.
  
  
 0.763
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.