node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cthe_0571 | Cthe_0957 | Cthe_0571 | Cthe_0957 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | KEGG: clo:HMPREF0868_0865 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | 0.418 |
Cthe_0571 | Cthe_3185 | Cthe_0571 | Cthe_3185 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | KEGG: mfe:Mefer_0980 archaeosine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase. | 0.503 |
Cthe_0571 | queA | Cthe_0571 | Cthe_0959 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | S-adenosylmethionine/tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.617 |
Cthe_0571 | ruvA | Cthe_0571 | Cthe_0181 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.533 |
Cthe_0571 | ruvB | Cthe_0571 | Cthe_0182 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.504 |
Cthe_0571 | tgt | Cthe_0571 | Cthe_0958 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form th [...] | 0.524 |
Cthe_0571 | trmFO | Cthe_0571 | Cthe_0461 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Gid protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.440 |
Cthe_0957 | Cthe_0571 | Cthe_0957 | Cthe_0571 | KEGG: clo:HMPREF0868_0865 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.418 |
Cthe_0957 | Cthe_0960 | Cthe_0957 | Cthe_0960 | KEGG: clo:HMPREF0868_0865 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | KEGG: cce:Ccel_0527 SpoIID/LytB domain protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D. | 0.517 |
Cthe_0957 | Cthe_3185 | Cthe_0957 | Cthe_3185 | KEGG: clo:HMPREF0868_0865 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | KEGG: mfe:Mefer_0980 archaeosine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase. | 0.469 |
Cthe_0957 | queA | Cthe_0957 | Cthe_0959 | KEGG: clo:HMPREF0868_0865 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | S-adenosylmethionine/tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.705 |
Cthe_0957 | secF | Cthe_0957 | Cthe_0903 | KEGG: clo:HMPREF0868_0865 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.850 |
Cthe_0957 | tgt | Cthe_0957 | Cthe_0958 | KEGG: clo:HMPREF0868_0865 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form th [...] | 0.726 |
Cthe_0960 | Cthe_0957 | Cthe_0960 | Cthe_0957 | KEGG: cce:Ccel_0527 SpoIID/LytB domain protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D. | KEGG: clo:HMPREF0868_0865 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | 0.517 |
Cthe_0960 | queA | Cthe_0960 | Cthe_0959 | KEGG: cce:Ccel_0527 SpoIID/LytB domain protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D. | S-adenosylmethionine/tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.597 |
Cthe_0960 | tgt | Cthe_0960 | Cthe_0958 | KEGG: cce:Ccel_0527 SpoIID/LytB domain protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form th [...] | 0.411 |
Cthe_3185 | Cthe_0571 | Cthe_3185 | Cthe_0571 | KEGG: mfe:Mefer_0980 archaeosine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.503 |
Cthe_3185 | Cthe_0957 | Cthe_3185 | Cthe_0957 | KEGG: mfe:Mefer_0980 archaeosine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase. | KEGG: clo:HMPREF0868_0865 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein. | 0.469 |
Cthe_3185 | queA | Cthe_3185 | Cthe_0959 | KEGG: mfe:Mefer_0980 archaeosine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase. | S-adenosylmethionine/tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.947 |
queA | Cthe_0571 | Cthe_0959 | Cthe_0571 | S-adenosylmethionine/tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.617 |