STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_1018PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ttj:TTHB086 sugar ABC transporter, permease protein. (289 aa)    
Predicted Functional Partners:
Cthe_1019
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tth:TT_P0040 putative transmembrane sugar transport protein.
 
 0.997
Cthe_1862
KEGG: cce:Ccel_2909 ABC transporter related; PFAM: ABC transporter related; TOBE domain-containing protein; SMART: AAA ATPase.
 
 
 0.985
Cthe_2126
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC0665 ABC-type sugar transport system, permease component.
 
 0.981
Cthe_1020
PFAM: extracellular solute-binding protein family 1; KEGG: ttj:TTHB082 sugar ABC transporter, periplasmic sugar-binding protein.
 
 
 0.971
Cthe_1046
PFAM: extracellular solute-binding protein family 1; KEGG: gym:GYMC10_3306 extracellular solute-binding protein family 1.
 
 
 0.866
Cthe_2128
PFAM: extracellular solute-binding protein family 1; KEGG: cac:CAC0664 sugar-binding periplasmic protein.
 
 
 0.823
Cthe_1957
PFAM: extracellular solute-binding protein family 1; KEGG: mrb:Mrub_0284 extracellular solute-binding protein family 1.
 
 
 0.817
Cthe_1587
ABC transporter related protein; KEGG: fnu:FN0376 iron(III)-transport ATP-binding protein SfuC; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
  
 0.722
Cthe_0795
KEGG: tte:TTE1825 glycosidases; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
  
 0.579
Cthe_0389
PFAM: PfkB domain protein; KEGG: PfkB domain protein.
 
  
 0.478
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.