STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
murJIntegral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (525 aa)    
Predicted Functional Partners:
cinA
KEGG: cce:Ccel_0674 competence/damage-inducible protein CinA; TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis domain protein; PFAM: CinA domain protein; molybdopterin binding domain.
       0.739
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
    0.554
Cthe_0638
FHA domain containing protein; KEGG: cac:CAC0039 DNA segregation ATP-ase FtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; Forkhead-associated protein; SMART: Forkhead-associated protein; AAA ATPase.
  
 
 0.493
Cthe_0979
KEGG: cce:Ccel_0478 penicillin-binding protein transpeptidase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; SMART: PASTA domain containing protein.
  
  
 0.489
Cthe_1334
KEGG: FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
  
 
 0.476
Cthe_3045
KEGG: aoe:Clos_2578 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
   
 
 0.462
Cthe_0249
PFAM: peptidase C11 clostripain; KEGG: bld:BLi04029 hypothetical protein.
    
 
 0.457
Cthe_1946
PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Thioredoxin domain-containing protein; KEGG: chy:CHY_0560 thioredoxin/thioredoxin-disulfide reductase.
 
  
 0.440
Cthe_0983
KEGG: cce:Ccel_0474 rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; Belongs to the SEDS family.
 
  
 0.407
ldh-2
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
    0.401
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.