STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_1416Hypothetical protein; KEGG: mmw:Mmwyl1_2194 translocation protein TolB. (109 aa)    
Predicted Functional Partners:
Cthe_1415
KEGG: cbi:CLJ_B3630 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
    0.793
Cthe_1414
KEGG: cbi:CLJ_B3629 putative lipoprotein.
  
    0.777
Cthe_1417
KEGG: mae:Maeo_0429 hypothetical protein.
  
    0.746
Cthe_1418
KEGG: lsp:Bsph_3575 hypothetical protein.
  
    0.745
Cthe_1413
KEGG: cbi:CLJ_B3629 putative lipoprotein.
  
    0.740
Cthe_1419
Hypothetical protein; KEGG: dsi:Dsim_GD25232 GD25232 gene product from transcript GD25232-RA.
  
    0.431
Cthe_3043
Hypothetical protein; KEGG: csc:Csac_0369 calcium-translocating P-type ATPase, PMCA-type.
   
    0.400
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.