STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_1969Hypothetical protein; KEGG: cno:NT01CX_0211 putative S-layer protein (peptidoglycan anchored). (459 aa)    
Predicted Functional Partners:
Cthe_1967
KEGG: oih:OB1316 hypothetical protein.
       0.706
Cthe_1968
Cell divisionFtsK/SpoIIIE; KEGG: cac:CAC0039 DNA segregation ATP-ase FtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase.
       0.706
Cthe_1966
Hypothetical protein; KEGG: esi:Exig_2157 succinate dehydrogenase flavoprotein subunit.
       0.684
Cthe_3376
Hypothetical protein; KEGG: smm:Smp_045610 rho GDP-dissociation inhibitor-related.
       0.585
Cthe_1972
KEGG: mch:Mchl_4932 apolipoprotein A1/A4/E.
  
    0.540
Cthe_1970
KEGG: isc:IscW_ISCW012825 hypothetical protein; Belongs to the WXG100 family.
  
    0.529
Cthe_1971
KEGG: pic:PICST_29284 hypothetical protein; Belongs to the WXG100 family.
  
    0.509
Cthe_1973
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ptm:GSPATT00039334001 hypothetical protein.
  
    0.467
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.