STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_2447ABC transporter related protein; KEGG: dth:DICTH_0297 ribose transport ATP-binding protein RbsA; PFAM: ABC transporter related; SMART: AAA ATPase. (495 aa)    
Predicted Functional Partners:
Cthe_2448
PFAM: inner-membrane translocator; KEGG: oih:OB2573 ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 0.999
Cthe_0392
PFAM: inner-membrane translocator; KEGG: ate:Athe_2265 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.998
Cthe_2446
Hypothetical protein; KEGG: rcu:RCOM_2001640 D-allose-binding periplasmic protein precursor, putative.
 0.997
Cthe_0393
KEGG: tit:Thit_1705 periplasmic binding protein/LacI transcriptional regulator.
 
 0.985
Cthe_0395
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.919
Cthe_0391
KEGG: ate:Athe_2266 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 
0.909
Cthe_2449
KEGG: eel:EUBELI_00289 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SMART: Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
  
  
 0.766
Cthe_1821
KEGG: gka:GK1935 ABC transporter (permease); TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
    
 0.745
Cthe_2441
KEGG: pjd:Pjdr2_3763 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR.
 
  
 0.694
Cthe_1580
PFAM: inner-membrane translocator; KEGG: fma:FMG_1011 ribose/galactoside ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
     0.682
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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