STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_2541PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: dhd:Dhaf_4107 nitrite and sulphite reductase 4Fe-4S region. (290 aa)    
Predicted Functional Partners:
Cthe_2540
KEGG: csc:Csac_1636 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein.
    0.993
Cthe_2542
PFAM: SirA-like domain-containing protein; KEGG: csc:Csac_1638 SirA family protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.970
Cthe_2535
Adenylylsulfate reductase, thioredoxin dependent; Reduction of activated sulfate into sulfite.
 
 
 0.959
Cthe_2538
KEGG: dhd:Dhaf_4110 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein.
 
    0.948
Cthe_0200
PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: ate:Athe_2358 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 0.923
Cthe_2537
Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.913
Cthe_1560
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cpy:Cphy_1228 pyridoxal-5'-phosphate-dependent protein beta subunit.
  
 
 0.908
Cthe_1840
Cysteine synthase A; KEGG: dsy:DSY4189 hypothetical protein; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.905
Cthe_2799
PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: amt:Amet_3707 cystathionine gamma-synthase.
   
 
  0.902
Cthe_2539
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: dhd:Dhaf_4109 UBA/ThiF-type NAD/FAD binding protein.
 
    0.899
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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