STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_2642TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: ckr:CKR_2187 hypothetical protein. (214 aa)    
Predicted Functional Partners:
Cthe_2644
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cbt:CLH_1450 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.991
Cthe_2640
TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; KEGG: hor:Hore_16940 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase.
  
 0.984
Cthe_2648
PFAM: sugar transferase; KEGG: dtu:Dtur_0890 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.983
Cthe_2643
PFAM: Nucleotidyl transferase; CBS domain containing protein; KEGG: cbt:CLH_1461 nucleotidyl transferase.
 
  
 0.968
Cthe_2645
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cbt:CLH_1449 NAD-dependent epimerase/dehydratase.
 
  
 0.965
Cthe_2641
TIGRFAM: N-acetylneuraminate synthase; KEGG: pmx:PERMA_1627 N-acetylneuraminate synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein.
  
 0.961
Cthe_2344
Undecaprenyl-phosphate galactose phosphotransferase; KEGG: drm:Dred_3047 sugar transferase; PFAM: sugar transferase.
  
 0.940
Cthe_2639
PFAM: acylneuraminate cytidylyltransferase; KEGG: tnp:Tnap_0416 acylneuraminate cytidylyltransferase.
 
  
 0.938
Cthe_2345
Glutamine--scyllo-inositol transaminase; KEGG: aco:Amico_1716 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.877
Cthe_2646
PFAM: Capsule polysaccharide biosynthesis protein; KEGG: syg:sync_0184 hypothetical protein.
  
    0.825
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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