STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_2700KEGG: amt:Amet_4142 hypothetical protein. (165 aa)    
Predicted Functional Partners:
Cthe_2699
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
  
    0.798
Cthe_3226
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase domain protein.
  
    0.765
Cthe_3227
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase domain protein.
  
    0.765
Cthe_3228
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase domain protein.
  
    0.765
Cthe_1778
PFAM: copper amine oxidase-like domain-containing protein; KEGG: cpo:COPRO5265_1473 protease, putative.
  
    0.764
Cthe_1827
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase domain protein.
 
    0.763
Cthe_0048
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase domain protein.
  
    0.762
Cthe_1374
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase domain protein.
  
    0.762
Cthe_2424
PFAM: copper amine oxidase-like domain-containing protein; KEGG: dae:Dtox_3690 copper amine oxidase domain protein.
  
     0.762
Cthe_2182
PFAM: Ig domain protein group 2 domain protein; KEGG: cce:Ccel_3406 Ig-like, group 2.
 
     0.761
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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