STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_3188PFAM: copper amine oxidase-like domain-containing protein; peptidase domain protein; KEGG: cbo:CBO0379 cell surface protein. (495 aa)    
Predicted Functional Partners:
ancA
Cellulosome anchoring protein cohesin region; Anchors the cellulosome to the cell surface by binding the duplicated segment that is present at the C-terminal end of CipA.
 
  
 0.789
Cthe_2384
PFAM: S-layer domain-containing protein; KEGG: aoe:Clos_2628 S-layer domain-containing protein.
 
    0.778
Cthe_2613
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0278 S-layer domain protein.
  
    0.778
Cthe_3079
PFAM: cellulosome anchoring protein cohesin region; S-layer domain-containing protein; KEGG: lsp:Bsph_2088 cell surface glycoprotein 2 precursor (S-layer protein 2).
  
    0.777
Cthe_2383
PFAM: copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_3336 hypothetical protein.
  
    0.775
Cthe_0327
PFAM: S-layer domain-containing protein; KEGG: gym:GYMC10_4794 legume lectin beta domain protein.
  
    0.774
Cthe_1307
PFAM: cellulosome anchoring protein cohesin region; S-layer domain-containing protein; KEGG: hmo:HM1_0137 multidomain protein with S-layer homology region, glug motif, ig motif, I-set domain, pkd domain.
  
    0.772
Cthe_2155
PFAM: S-layer domain-containing protein; KEGG: gym:GYMC10_4794 legume lectin beta domain protein.
  
     0.772
olpB
PFAM: cellulosome anchoring protein cohesin region; S-layer domain-containing protein; KEGG: lel:LELG_02536 hypothetical protein.
  
    0.772
Cthe_1505
PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2998 S-layer domain-containing protein.
  
    0.771
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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