STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sde_0011Phospholipid/glycerol acyltransferase. (240 aa)    
Predicted Functional Partners:
Sde_0255
Diacylglycerol kinase, catalytic region.
  
 
 0.926
Sde_2592
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.918
Sde_0690
Phosphatidate cytidylyltransferase.
  
 
  0.909
Sde_1725
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
     
 0.902
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.816
Sde_1356
Methyl-accepting chemotaxis sensory transducer.
    
 0.807
Sde_1482
FAD dependent oxidoreductase.
    
 0.807
Sde_0010
Conserved hypothetical membrane protein; Has a signal peptide and three transmembrane domains.
       0.773
glyS
glycyl-tRNA synthetase is a tetramer of two alpha and two beta chains.
  
    0.638
glyQ
glycyl-tRNA synthetase is a tetramer of two alpha and two beta chains.
  
    0.638
Your Current Organism:
Saccharophagus degradans
NCBI taxonomy Id: 203122
Other names: Microbulbifer degradans 2-40, Microbulbifer sp. 2-40, S. degradans 2-40, Saccharophagus degradans 2-40, Saccharophagus degradans ATCC 43961, Saccharophagus degradans str. 2-40, Saccharophagus degradans strain 2-40, bacterium 2-40
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