Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_0165 | Sde_0166 | Sde_0165 | Sde_0166 | Conserved hypothetical protein. | acyl-CoA dehydrogenase protein. | 0.942 |
Sde_0165 | Sde_0167 | Sde_0165 | Sde_0167 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.962 |
Sde_0165 | Sde_0170 | Sde_0165 | Sde_0170 | Conserved hypothetical protein. | Hypothetical protein. | 0.887 |
Sde_0165 | Sde_0171 | Sde_0165 | Sde_0171 | Conserved hypothetical protein. | Hypothetical protein. | 0.521 |
Sde_0165 | Sde_0172 | Sde_0165 | Sde_0172 | Conserved hypothetical protein. | FkbH domain. | 0.590 |
Sde_0165 | Sde_0173 | Sde_0165 | Sde_0173 | Conserved hypothetical protein. | Hypothetical protein. | 0.883 |
Sde_0165 | Sde_3725 | Sde_0165 | Sde_3725 | Conserved hypothetical protein. | Amino acid adenylation. | 0.971 |
Sde_0165 | gly2G | Sde_0165 | Sde_0169 | Conserved hypothetical protein. | Putative retaining b-glycosidase. | 0.894 |
Sde_0166 | Sde_0165 | Sde_0166 | Sde_0165 | acyl-CoA dehydrogenase protein. | Conserved hypothetical protein. | 0.942 |
Sde_0166 | Sde_0167 | Sde_0166 | Sde_0167 | acyl-CoA dehydrogenase protein. | Conserved hypothetical protein. | 0.948 |
Sde_0166 | Sde_0170 | Sde_0166 | Sde_0170 | acyl-CoA dehydrogenase protein. | Hypothetical protein. | 0.890 |
Sde_0166 | Sde_0171 | Sde_0166 | Sde_0171 | acyl-CoA dehydrogenase protein. | Hypothetical protein. | 0.555 |
Sde_0166 | Sde_0172 | Sde_0166 | Sde_0172 | acyl-CoA dehydrogenase protein. | FkbH domain. | 0.620 |
Sde_0166 | Sde_0173 | Sde_0166 | Sde_0173 | acyl-CoA dehydrogenase protein. | Hypothetical protein. | 0.882 |
Sde_0166 | Sde_3725 | Sde_0166 | Sde_3725 | acyl-CoA dehydrogenase protein. | Amino acid adenylation. | 0.649 |
Sde_0166 | gly2G | Sde_0166 | Sde_0169 | acyl-CoA dehydrogenase protein. | Putative retaining b-glycosidase. | 0.885 |
Sde_0167 | Sde_0165 | Sde_0167 | Sde_0165 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.962 |
Sde_0167 | Sde_0166 | Sde_0167 | Sde_0166 | Conserved hypothetical protein. | acyl-CoA dehydrogenase protein. | 0.948 |
Sde_0167 | Sde_0170 | Sde_0167 | Sde_0170 | Conserved hypothetical protein. | Hypothetical protein. | 0.896 |
Sde_0167 | Sde_0171 | Sde_0167 | Sde_0171 | Conserved hypothetical protein. | Hypothetical protein. | 0.687 |
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