Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Sde_1755 | arb43K | Sde_1755 | Sde_0822 | Hypothetical protein. | Putative b-xylosidase/a-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. | 0.761 |
| Sde_1755 | cel9A | Sde_1755 | Sde_0636 | Hypothetical protein. | Putative endoglucanase. | 0.624 |
| Sde_1755 | man26A | Sde_1755 | Sde_3691 | Hypothetical protein. | Putative endo-b-1,4-mannanase; Belongs to the glycosyl hydrolase 26 family. | 0.547 |
| Sde_1755 | pel3A | Sde_1755 | Sde_2308 | Hypothetical protein. | Putative pectate lyase. | 0.418 |
| Sde_1755 | pel9A | Sde_1755 | Sde_2946 | Hypothetical protein. | Putative pectate lyase. | 0.665 |
| Sde_1755 | xyn10A | Sde_1755 | Sde_0181 | Hypothetical protein. | Putative xylanase. | 0.739 |
| Sde_1755 | xyn11A | Sde_1755 | Sde_0701 | Hypothetical protein. | Putative xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family. | 0.686 |
| arb43K | Sde_1755 | Sde_0822 | Sde_1755 | Putative b-xylosidase/a-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. | Hypothetical protein. | 0.761 |
| arb43K | cbm2C | Sde_0822 | Sde_0182 | Putative b-xylosidase/a-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. | Cellulose-binding protein; Reference: Taylor, et al. 2006. Complete Cellulase System in the Marine Bacterium Saccharophagus degradans Starin 2-40T. Journal of Bacteriology. | 0.623 |
| arb43K | cel9A | Sde_0822 | Sde_0636 | Putative b-xylosidase/a-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. | Putative endoglucanase. | 0.608 |
| arb43K | cel9B | Sde_0822 | Sde_0649 | Putative b-xylosidase/a-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. | Cellulose 1,4-beta-cellobiosidase. | 0.445 |
| arb43K | man26A | Sde_0822 | Sde_3691 | Putative b-xylosidase/a-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. | Putative endo-b-1,4-mannanase; Belongs to the glycosyl hydrolase 26 family. | 0.568 |
| arb43K | xyn10A | Sde_0822 | Sde_0181 | Putative b-xylosidase/a-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. | Putative xylanase. | 0.699 |
| arb43K | xyn11A | Sde_0822 | Sde_0701 | Putative b-xylosidase/a-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. | Putative xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family. | 0.696 |
| cbm2C | arb43K | Sde_0182 | Sde_0822 | Cellulose-binding protein; Reference: Taylor, et al. 2006. Complete Cellulase System in the Marine Bacterium Saccharophagus degradans Starin 2-40T. Journal of Bacteriology. | Putative b-xylosidase/a-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family. | 0.623 |
| cbm2C | pel1D | Sde_0182 | Sde_3448 | Cellulose-binding protein; Reference: Taylor, et al. 2006. Complete Cellulase System in the Marine Bacterium Saccharophagus degradans Starin 2-40T. Journal of Bacteriology. | Putative pectin/pectate lyase. | 0.478 |
| cbm2C | pel9A | Sde_0182 | Sde_2946 | Cellulose-binding protein; Reference: Taylor, et al. 2006. Complete Cellulase System in the Marine Bacterium Saccharophagus degradans Starin 2-40T. Journal of Bacteriology. | Putative pectate lyase. | 0.563 |
| cbm2C | xyn10A | Sde_0182 | Sde_0181 | Cellulose-binding protein; Reference: Taylor, et al. 2006. Complete Cellulase System in the Marine Bacterium Saccharophagus degradans Starin 2-40T. Journal of Bacteriology. | Putative xylanase. | 0.689 |
| cbm2C | xyn11A | Sde_0182 | Sde_0701 | Cellulose-binding protein; Reference: Taylor, et al. 2006. Complete Cellulase System in the Marine Bacterium Saccharophagus degradans Starin 2-40T. Journal of Bacteriology. | Putative xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family. | 0.526 |
| cel9A | Sde_1755 | Sde_0636 | Sde_1755 | Putative endoglucanase. | Hypothetical protein. | 0.624 |
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