STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
man5PB-mannosidase-like protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (457 aa)    
Predicted Functional Partners:
man26A
Putative endo-b-1,4-mannanase; Belongs to the glycosyl hydrolase 26 family.
 
  
 0.991
man5Q
Putative retaining b-glycosidase.
  
  
 0.984
man5O
Putative mannan endo-1,4-b-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.971
man5N
Putative mannan endo-1,4-b-mannosidase.
  
 0.968
Sde_0507
Glycosidase, PH1107-related; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family.
 
     0.876
Sde_0508
Conserved hypothetical protein; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
 
   
 0.836
Sde_2639
Fructokinase.
     
  0.800
Sde_3962
Fructokinase.
     
  0.800
gly5R
Putative retaining b-glycosidase.
  
     0.739
arg53A
Putative endo-1,4-b-galactanase.
  
     0.715
Your Current Organism:
Saccharophagus degradans
NCBI taxonomy Id: 203122
Other names: Microbulbifer degradans 2-40, Microbulbifer sp. 2-40, S. degradans 2-40, Saccharophagus degradans 2-40, Saccharophagus degradans ATCC 43961, Saccharophagus degradans str. 2-40, Saccharophagus degradans strain 2-40, bacterium 2-40
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