Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sde_1029 | Sde_1030 | Hypothetical protein. | Hypothetical protein. | 0.995 |
Sde_1029 | Sde_1031 | Hypothetical protein. | Putative metabolite transport protein CsbC. | 0.444 |
Sde_1029 | Sde_3725 | Hypothetical protein. | Amino acid adenylation. | 0.495 |
Sde_1030 | Sde_1029 | Hypothetical protein. | Hypothetical protein. | 0.995 |
Sde_1030 | Sde_1031 | Hypothetical protein. | Putative metabolite transport protein CsbC. | 0.444 |
Sde_1031 | Sde_1029 | Putative metabolite transport protein CsbC. | Hypothetical protein. | 0.444 |
Sde_1031 | Sde_1030 | Putative metabolite transport protein CsbC. | Hypothetical protein. | 0.444 |
Sde_1031 | Sde_1032 | Putative metabolite transport protein CsbC. | Putative transmembrane sugar transporter. | 0.987 |
Sde_1031 | Sde_3725 | Putative metabolite transport protein CsbC. | Amino acid adenylation. | 0.461 |
Sde_1032 | Sde_1031 | Putative transmembrane sugar transporter. | Putative metabolite transport protein CsbC. | 0.987 |
Sde_1032 | Sde_3725 | Putative transmembrane sugar transporter. | Amino acid adenylation. | 0.461 |
Sde_3725 | Sde_1029 | Amino acid adenylation. | Hypothetical protein. | 0.495 |
Sde_3725 | Sde_1031 | Amino acid adenylation. | Putative metabolite transport protein CsbC. | 0.461 |
Sde_3725 | Sde_1032 | Amino acid adenylation. | Putative transmembrane sugar transporter. | 0.461 |