Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_1150 | Sde_1151 | Sde_1150 | Sde_1151 | Amino acid-binding ACT. | Protein of unknown function UPF0270; Belongs to the UPF0270 family. | 0.573 |
Sde_1150 | Sde_1152 | Sde_1150 | Sde_1152 | Amino acid-binding ACT. | Conserved hypothetical protein. | 0.600 |
Sde_1150 | Sde_1702 | Sde_1150 | Sde_1702 | Amino acid-binding ACT. | DNA internalization-related competence protein ComEC/Rec2. | 0.408 |
Sde_1150 | Sde_2236 | Sde_1150 | Sde_2236 | Amino acid-binding ACT. | Conserved hypothetical protein. | 0.415 |
Sde_1150 | gcvP | Sde_1150 | Sde_2476 | Amino acid-binding ACT. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.616 |
Sde_1150 | rlmM | Sde_1150 | Sde_1153 | Amino acid-binding ACT. | Conserved hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.497 |
Sde_1151 | Sde_1150 | Sde_1151 | Sde_1150 | Protein of unknown function UPF0270; Belongs to the UPF0270 family. | Amino acid-binding ACT. | 0.573 |
Sde_1151 | Sde_1152 | Sde_1151 | Sde_1152 | Protein of unknown function UPF0270; Belongs to the UPF0270 family. | Conserved hypothetical protein. | 0.806 |
Sde_1151 | rlmM | Sde_1151 | Sde_1153 | Protein of unknown function UPF0270; Belongs to the UPF0270 family. | Conserved hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.819 |
Sde_1152 | Sde_1150 | Sde_1152 | Sde_1150 | Conserved hypothetical protein. | Amino acid-binding ACT. | 0.600 |
Sde_1152 | Sde_1151 | Sde_1152 | Sde_1151 | Conserved hypothetical protein. | Protein of unknown function UPF0270; Belongs to the UPF0270 family. | 0.806 |
Sde_1152 | rlmM | Sde_1152 | Sde_1153 | Conserved hypothetical protein. | Conserved hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | 0.793 |
Sde_1702 | Sde_1150 | Sde_1702 | Sde_1150 | DNA internalization-related competence protein ComEC/Rec2. | Amino acid-binding ACT. | 0.408 |
Sde_2236 | Sde_1150 | Sde_2236 | Sde_1150 | Conserved hypothetical protein. | Amino acid-binding ACT. | 0.415 |
gcvP | Sde_1150 | Sde_2476 | Sde_1150 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Amino acid-binding ACT. | 0.616 |
rlmM | Sde_1150 | Sde_1153 | Sde_1150 | Conserved hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | Amino acid-binding ACT. | 0.497 |
rlmM | Sde_1151 | Sde_1153 | Sde_1151 | Conserved hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | Protein of unknown function UPF0270; Belongs to the UPF0270 family. | 0.819 |
rlmM | Sde_1152 | Sde_1153 | Sde_1152 | Conserved hypothetical protein; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily. | Conserved hypothetical protein. | 0.793 |