Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_0146 | Sde_1192 | Sde_0146 | Sde_1192 | Asparagine synthase, glutamine-hydrolyzing. | Aspartate kinase. | 0.856 |
Sde_0146 | Sde_1232 | Sde_0146 | Sde_1232 | Asparagine synthase, glutamine-hydrolyzing. | Aminotransferase. | 0.915 |
Sde_0146 | Sde_1300 | Sde_0146 | Sde_1300 | Asparagine synthase, glutamine-hydrolyzing. | Aspartate kinase; Belongs to the aspartokinase family. | 0.856 |
Sde_0146 | argG | Sde_0146 | Sde_2423 | Asparagine synthase, glutamine-hydrolyzing. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.918 |
Sde_0146 | purA | Sde_0146 | Sde_2661 | Asparagine synthase, glutamine-hydrolyzing. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.929 |
Sde_1190 | Sde_1192 | Sde_1190 | Sde_1192 | Aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aspartate kinase. | 0.895 |
Sde_1190 | Sde_1193 | Sde_1190 | Sde_1193 | Aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Tetratricopeptide TPR_2. | 0.569 |
Sde_1190 | Sde_2083 | Sde_1190 | Sde_2083 | Aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aspartate semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.911 |
Sde_1190 | ectA | Sde_1190 | Sde_1189 | Aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | L-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A. | 0.998 |
Sde_1190 | ectC | Sde_1190 | Sde_1191 | Aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant. | 0.933 |
Sde_1192 | Sde_0146 | Sde_1192 | Sde_0146 | Aspartate kinase. | Asparagine synthase, glutamine-hydrolyzing. | 0.856 |
Sde_1192 | Sde_1190 | Sde_1192 | Sde_1190 | Aspartate kinase. | Aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.895 |
Sde_1192 | Sde_1193 | Sde_1192 | Sde_1193 | Aspartate kinase. | Tetratricopeptide TPR_2. | 0.903 |
Sde_1192 | Sde_1232 | Sde_1192 | Sde_1232 | Aspartate kinase. | Aminotransferase. | 0.829 |
Sde_1192 | Sde_1300 | Sde_1192 | Sde_1300 | Aspartate kinase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.900 |
Sde_1192 | Sde_2083 | Sde_1192 | Sde_2083 | Aspartate kinase. | Aspartate semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.977 |
Sde_1192 | argG | Sde_1192 | Sde_2423 | Aspartate kinase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.840 |
Sde_1192 | ectA | Sde_1192 | Sde_1189 | Aspartate kinase. | L-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A. | 0.863 |
Sde_1192 | ectC | Sde_1192 | Sde_1191 | Aspartate kinase. | Ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant. | 0.922 |
Sde_1192 | purA | Sde_1192 | Sde_2661 | Aspartate kinase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.824 |
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