Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_0526 | Sde_1474 | Sde_0526 | Sde_1474 | ABC transporter related. | Protein of unknown function DUF1653. | 0.417 |
Sde_1470 | Sde_1472 | Sde_1470 | Sde_1472 | Hypothetical protein. | Flavodoxin, long chain; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | 0.773 |
Sde_1470 | Sde_1473 | Sde_1470 | Sde_1473 | Hypothetical protein. | Flavodoxin/nitric oxide synthase. | 0.757 |
Sde_1470 | Sde_1474 | Sde_1470 | Sde_1474 | Hypothetical protein. | Protein of unknown function DUF1653. | 0.529 |
Sde_1470 | Sde_1475 | Sde_1470 | Sde_1475 | Hypothetical protein. | rRNA (guanine-N(1)-)-methyltransferase. | 0.529 |
Sde_1470 | mnmC | Sde_1470 | Sde_1471 | Hypothetical protein. | Protein of unknown function DUF752; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family. | 0.787 |
Sde_1470 | tadA | Sde_1470 | Sde_1476 | Hypothetical protein. | tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.529 |
Sde_1472 | Sde_1470 | Sde_1472 | Sde_1470 | Flavodoxin, long chain; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | Hypothetical protein. | 0.773 |
Sde_1472 | Sde_1473 | Sde_1472 | Sde_1473 | Flavodoxin, long chain; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | Flavodoxin/nitric oxide synthase. | 0.757 |
Sde_1472 | Sde_1474 | Sde_1472 | Sde_1474 | Flavodoxin, long chain; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | Protein of unknown function DUF1653. | 0.529 |
Sde_1472 | Sde_1475 | Sde_1472 | Sde_1475 | Flavodoxin, long chain; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | rRNA (guanine-N(1)-)-methyltransferase. | 0.529 |
Sde_1472 | mnmC | Sde_1472 | Sde_1471 | Flavodoxin, long chain; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | Protein of unknown function DUF752; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family. | 0.828 |
Sde_1472 | tadA | Sde_1472 | Sde_1476 | Flavodoxin, long chain; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.529 |
Sde_1473 | Sde_1470 | Sde_1473 | Sde_1470 | Flavodoxin/nitric oxide synthase. | Hypothetical protein. | 0.757 |
Sde_1473 | Sde_1472 | Sde_1473 | Sde_1472 | Flavodoxin/nitric oxide synthase. | Flavodoxin, long chain; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | 0.757 |
Sde_1473 | Sde_1474 | Sde_1473 | Sde_1474 | Flavodoxin/nitric oxide synthase. | Protein of unknown function DUF1653. | 0.540 |
Sde_1473 | Sde_1475 | Sde_1473 | Sde_1475 | Flavodoxin/nitric oxide synthase. | rRNA (guanine-N(1)-)-methyltransferase. | 0.540 |
Sde_1473 | mnmC | Sde_1473 | Sde_1471 | Flavodoxin/nitric oxide synthase. | Protein of unknown function DUF752; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family. | 0.772 |
Sde_1473 | tadA | Sde_1473 | Sde_1476 | Flavodoxin/nitric oxide synthase. | tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.540 |
Sde_1474 | Sde_0526 | Sde_1474 | Sde_0526 | Protein of unknown function DUF1653. | ABC transporter related. | 0.417 |
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