Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_1102 | Sde_1674 | Sde_1102 | Sde_1674 | SapC. | Cupin 4. | 0.756 |
Sde_1102 | Sde_1675 | Sde_1102 | Sde_1675 | SapC. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.754 |
Sde_1102 | mnmA | Sde_1102 | Sde_1677 | SapC. | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.754 |
Sde_1261 | Sde_1674 | Sde_1261 | Sde_1674 | SapC. | Cupin 4. | 0.756 |
Sde_1261 | Sde_1675 | Sde_1261 | Sde_1675 | SapC. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.754 |
Sde_1261 | mnmA | Sde_1261 | Sde_1677 | SapC. | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.754 |
Sde_1399 | Sde_1674 | Sde_1399 | Sde_1674 | SapC. | Cupin 4. | 0.756 |
Sde_1399 | Sde_1675 | Sde_1399 | Sde_1675 | SapC. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.754 |
Sde_1399 | mnmA | Sde_1399 | Sde_1677 | SapC. | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.754 |
Sde_1673 | Sde_1674 | Sde_1673 | Sde_1674 | GCN5-related N-acetyltransferase. | Cupin 4. | 0.657 |
Sde_1673 | Sde_1675 | Sde_1673 | Sde_1675 | GCN5-related N-acetyltransferase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.565 |
Sde_1673 | mnmA | Sde_1673 | Sde_1677 | GCN5-related N-acetyltransferase. | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.463 |
Sde_1674 | Sde_1102 | Sde_1674 | Sde_1102 | Cupin 4. | SapC. | 0.756 |
Sde_1674 | Sde_1261 | Sde_1674 | Sde_1261 | Cupin 4. | SapC. | 0.756 |
Sde_1674 | Sde_1399 | Sde_1674 | Sde_1399 | Cupin 4. | SapC. | 0.756 |
Sde_1674 | Sde_1673 | Sde_1674 | Sde_1673 | Cupin 4. | GCN5-related N-acetyltransferase. | 0.657 |
Sde_1674 | Sde_1675 | Sde_1674 | Sde_1675 | Cupin 4. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.874 |
Sde_1674 | Sde_2392 | Sde_1674 | Sde_2392 | Cupin 4. | SapC. | 0.756 |
Sde_1674 | Sde_2830 | Sde_1674 | Sde_2830 | Cupin 4. | SapC. | 0.756 |
Sde_1674 | Sde_3054 | Sde_1674 | Sde_3054 | Cupin 4. | SapC. | 0.756 |
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