Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_1700 | Sde_1701 | Sde_1700 | Sde_1701 | CBS domain protein. | Conserved hypothetical protein. | 0.476 |
Sde_1700 | Sde_1712 | Sde_1700 | Sde_1712 | CBS domain protein. | CBS domain protein. | 0.434 |
Sde_1700 | Sde_2113 | Sde_1700 | Sde_2113 | CBS domain protein. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.410 |
Sde_1700 | Sde_2131 | Sde_1700 | Sde_2131 | CBS domain protein. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.410 |
Sde_1700 | guaA | Sde_1700 | Sde_1460 | CBS domain protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.514 |
Sde_1700 | purL | Sde_1700 | Sde_1478 | CBS domain protein. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.485 |
Sde_1700 | ribBA | Sde_1700 | Sde_3456 | CBS domain protein. | 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.400 |
Sde_1701 | Sde_1700 | Sde_1701 | Sde_1700 | Conserved hypothetical protein. | CBS domain protein. | 0.476 |
Sde_1712 | Sde_1700 | Sde_1712 | Sde_1700 | CBS domain protein. | CBS domain protein. | 0.434 |
Sde_1712 | Sde_2113 | Sde_1712 | Sde_2113 | CBS domain protein. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.410 |
Sde_1712 | Sde_2131 | Sde_1712 | Sde_2131 | CBS domain protein. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.410 |
Sde_1712 | guaA | Sde_1712 | Sde_1460 | CBS domain protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.514 |
Sde_1712 | purL | Sde_1712 | Sde_1478 | CBS domain protein. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.485 |
Sde_1712 | ribBA | Sde_1712 | Sde_3456 | CBS domain protein. | 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.400 |
Sde_2113 | Sde_1700 | Sde_2113 | Sde_1700 | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | CBS domain protein. | 0.410 |
Sde_2113 | Sde_1712 | Sde_2113 | Sde_1712 | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | CBS domain protein. | 0.410 |
Sde_2113 | Sde_2131 | Sde_2113 | Sde_2131 | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.905 |
Sde_2131 | Sde_1700 | Sde_2131 | Sde_1700 | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | CBS domain protein. | 0.410 |
Sde_2131 | Sde_1712 | Sde_2131 | Sde_1712 | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | CBS domain protein. | 0.410 |
Sde_2131 | Sde_2113 | Sde_2131 | Sde_2113 | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.905 |
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