Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_0548 | Sde_0820 | Sde_0548 | Sde_0820 | PAS/PAC sensor signal transduction histidine kinase. | Protein of unknown function DUF1631. | 0.517 |
Sde_0548 | Sde_0889 | Sde_0548 | Sde_0889 | PAS/PAC sensor signal transduction histidine kinase. | TonB-dependent receptor, plug. | 0.453 |
Sde_0548 | Sde_2481 | Sde_0548 | Sde_2481 | PAS/PAC sensor signal transduction histidine kinase. | Conserved hypothetical protein. | 0.493 |
Sde_0548 | Sde_2542 | Sde_0548 | Sde_2542 | PAS/PAC sensor signal transduction histidine kinase. | TonB-dependent receptor, plug. | 0.703 |
Sde_0548 | Sde_2801 | Sde_0548 | Sde_2801 | PAS/PAC sensor signal transduction histidine kinase. | VCBS domain protein. | 0.473 |
Sde_0612 | Sde_0889 | Sde_0612 | Sde_0889 | Protein of unknown function DUF1124, sugar phosphate isomerase putative. | TonB-dependent receptor, plug. | 0.430 |
Sde_0612 | Sde_2481 | Sde_0612 | Sde_2481 | Protein of unknown function DUF1124, sugar phosphate isomerase putative. | Conserved hypothetical protein. | 0.624 |
Sde_0612 | pes8A | Sde_0612 | Sde_3447 | Protein of unknown function DUF1124, sugar phosphate isomerase putative. | Pectin methylesterase-like protein. | 0.587 |
Sde_0820 | Sde_0548 | Sde_0820 | Sde_0548 | Protein of unknown function DUF1631. | PAS/PAC sensor signal transduction histidine kinase. | 0.517 |
Sde_0820 | Sde_2481 | Sde_0820 | Sde_2481 | Protein of unknown function DUF1631. | Conserved hypothetical protein. | 0.490 |
Sde_0820 | Sde_2542 | Sde_0820 | Sde_2542 | Protein of unknown function DUF1631. | TonB-dependent receptor, plug. | 0.652 |
Sde_0889 | Sde_0548 | Sde_0889 | Sde_0548 | TonB-dependent receptor, plug. | PAS/PAC sensor signal transduction histidine kinase. | 0.453 |
Sde_0889 | Sde_0612 | Sde_0889 | Sde_0612 | TonB-dependent receptor, plug. | Protein of unknown function DUF1124, sugar phosphate isomerase putative. | 0.430 |
Sde_0889 | Sde_2481 | Sde_0889 | Sde_2481 | TonB-dependent receptor, plug. | Conserved hypothetical protein. | 0.585 |
Sde_0889 | Sde_2801 | Sde_0889 | Sde_2801 | TonB-dependent receptor, plug. | VCBS domain protein. | 0.710 |
Sde_0889 | pes8A | Sde_0889 | Sde_3447 | TonB-dependent receptor, plug. | Pectin methylesterase-like protein. | 0.770 |
Sde_0889 | ply7E | Sde_0889 | Sde_2839 | TonB-dependent receptor, plug. | Putative polysaccharide lyase. | 0.447 |
Sde_2480 | Sde_2481 | Sde_2480 | Sde_2481 | Thioesterase superfamily. | Conserved hypothetical protein. | 0.531 |
Sde_2480 | Sde_2482 | Sde_2480 | Sde_2482 | Thioesterase superfamily. | Hypothetical protein. | 0.409 |
Sde_2481 | Sde_0548 | Sde_2481 | Sde_0548 | Conserved hypothetical protein. | PAS/PAC sensor signal transduction histidine kinase. | 0.493 |
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