Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_1066 | Sde_2495 | Sde_1066 | Sde_2495 | Hypothetical protein. | Transcriptional regulator, AraC family. | 0.463 |
Sde_1066 | cbm6D | Sde_1066 | Sde_3260 | Hypothetical protein. | Putative polysaccharide-binding protein. | 0.475 |
Sde_2495 | Sde_1066 | Sde_2495 | Sde_1066 | Transcriptional regulator, AraC family. | Hypothetical protein. | 0.463 |
Sde_2495 | Sde_2496 | Sde_2495 | Sde_2496 | Transcriptional regulator, AraC family. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.539 |
Sde_2495 | Sde_2642 | Sde_2495 | Sde_2642 | Transcriptional regulator, AraC family. | Transcriptional regulator, AraC family. | 0.494 |
Sde_2495 | Sde_3613 | Sde_2495 | Sde_3613 | Transcriptional regulator, AraC family. | Transcriptional regulator, AraC family. | 0.521 |
Sde_2495 | cbm6D | Sde_2495 | Sde_3260 | Transcriptional regulator, AraC family. | Putative polysaccharide-binding protein. | 0.461 |
Sde_2496 | Sde_2495 | Sde_2496 | Sde_2495 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Transcriptional regulator, AraC family. | 0.539 |
Sde_2642 | Sde_2495 | Sde_2642 | Sde_2495 | Transcriptional regulator, AraC family. | Transcriptional regulator, AraC family. | 0.494 |
Sde_3613 | Sde_2495 | Sde_3613 | Sde_2495 | Transcriptional regulator, AraC family. | Transcriptional regulator, AraC family. | 0.521 |
cbm6D | Sde_1066 | Sde_3260 | Sde_1066 | Putative polysaccharide-binding protein. | Hypothetical protein. | 0.475 |
cbm6D | Sde_2495 | Sde_3260 | Sde_2495 | Putative polysaccharide-binding protein. | Transcriptional regulator, AraC family. | 0.461 |