Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_0493 | Sde_2576 | Sde_0493 | Sde_2576 | Peptidase M23B. | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.547 |
Sde_0900 | Sde_2576 | Sde_0900 | Sde_2576 | Arsenate reductase. | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.668 |
Sde_2574 | Sde_2575 | Sde_2574 | Sde_2575 | Protein of unknown function UPF0118. | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | 0.844 |
Sde_2574 | Sde_2576 | Sde_2574 | Sde_2576 | Protein of unknown function UPF0118. | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.588 |
Sde_2575 | Sde_2574 | Sde_2575 | Sde_2574 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Protein of unknown function UPF0118. | 0.844 |
Sde_2575 | Sde_2576 | Sde_2575 | Sde_2576 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.593 |
Sde_2576 | Sde_0493 | Sde_2576 | Sde_0493 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Peptidase M23B. | 0.547 |
Sde_2576 | Sde_0900 | Sde_2576 | Sde_0900 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Arsenate reductase. | 0.668 |
Sde_2576 | Sde_2574 | Sde_2576 | Sde_2574 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Protein of unknown function UPF0118. | 0.588 |
Sde_2576 | Sde_2575 | Sde_2576 | Sde_2575 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | 0.593 |
Sde_2576 | bamA | Sde_2576 | Sde_2589 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.480 |
bamA | Sde_2576 | Sde_2589 | Sde_2576 | Surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.480 |