Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_0081 | Sde_3628 | Sde_0081 | Sde_3628 | Chemotaxis sensory transducer. | CheB methylesterase. | 0.776 |
Sde_0081 | Sde_3629 | Sde_0081 | Sde_3629 | Chemotaxis sensory transducer. | Response regulator receiver. | 0.936 |
Sde_0081 | Sde_3630 | Sde_0081 | Sde_3630 | Chemotaxis sensory transducer. | Protein-glutamate O-methyltransferase. | 0.930 |
Sde_0081 | cheB1 | Sde_0081 | Sde_2160 | Chemotaxis sensory transducer. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.980 |
Sde_0081 | cheB2 | Sde_0081 | Sde_3102 | Chemotaxis sensory transducer. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.980 |
Sde_0391 | Sde_3628 | Sde_0391 | Sde_3628 | Methyl-accepting chemotaxis sensory transducer. | CheB methylesterase. | 0.783 |
Sde_0391 | Sde_3629 | Sde_0391 | Sde_3629 | Methyl-accepting chemotaxis sensory transducer. | Response regulator receiver. | 0.938 |
Sde_0391 | Sde_3630 | Sde_0391 | Sde_3630 | Methyl-accepting chemotaxis sensory transducer. | Protein-glutamate O-methyltransferase. | 0.930 |
Sde_0391 | cheB1 | Sde_0391 | Sde_2160 | Methyl-accepting chemotaxis sensory transducer. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.980 |
Sde_0391 | cheB2 | Sde_0391 | Sde_3102 | Methyl-accepting chemotaxis sensory transducer. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.980 |
Sde_1108 | Sde_3628 | Sde_1108 | Sde_3628 | Chemotaxis sensory transducer. | CheB methylesterase. | 0.765 |
Sde_1108 | Sde_3629 | Sde_1108 | Sde_3629 | Chemotaxis sensory transducer. | Response regulator receiver. | 0.932 |
Sde_1108 | Sde_3630 | Sde_1108 | Sde_3630 | Chemotaxis sensory transducer. | Protein-glutamate O-methyltransferase. | 0.929 |
Sde_1108 | cheB1 | Sde_1108 | Sde_2160 | Chemotaxis sensory transducer. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.980 |
Sde_1108 | cheB2 | Sde_1108 | Sde_3102 | Chemotaxis sensory transducer. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.979 |
Sde_2316 | Sde_3628 | Sde_2316 | Sde_3628 | Chemotaxis sensory transducer. | CheB methylesterase. | 0.692 |
Sde_2316 | Sde_3629 | Sde_2316 | Sde_3629 | Chemotaxis sensory transducer. | Response regulator receiver. | 0.906 |
Sde_2316 | Sde_3630 | Sde_2316 | Sde_3630 | Chemotaxis sensory transducer. | Protein-glutamate O-methyltransferase. | 0.918 |
Sde_2316 | cheB1 | Sde_2316 | Sde_2160 | Chemotaxis sensory transducer. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.980 |
Sde_2316 | cheB2 | Sde_2316 | Sde_3102 | Chemotaxis sensory transducer. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.979 |
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