Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Sde_0264 | Sde_0994 | ATP-binding region, ATPase-like protein. | Regulatory protein, LuxR. | 0.684 |
| Sde_0264 | Sde_1409 | ATP-binding region, ATPase-like protein. | ATP-binding region, ATPase-like protein. | 0.983 |
| Sde_0264 | Sde_1571 | ATP-binding region, ATPase-like protein. | Transcriptional regulator, XRE family. | 0.684 |
| Sde_0264 | Sde_2054 | ATP-binding region, ATPase-like protein. | Response regulator receiver. | 0.755 |
| Sde_0264 | Sde_3120 | ATP-binding region, ATPase-like protein. | ATP-binding region, ATPase-like protein. | 0.987 |
| Sde_0264 | Sde_3479 | ATP-binding region, ATPase-like protein. | PspA/IM30. | 0.554 |
| Sde_0264 | Sde_3820 | ATP-binding region, ATPase-like protein. | Two component transcriptional regulator, LuxR family. | 0.684 |
| Sde_0264 | Sde_3821 | ATP-binding region, ATPase-like protein. | Histidine kinase, dimerisation and phosphoacceptor region. | 0.549 |
| Sde_0994 | Sde_0264 | Regulatory protein, LuxR. | ATP-binding region, ATPase-like protein. | 0.684 |
| Sde_0994 | Sde_1409 | Regulatory protein, LuxR. | ATP-binding region, ATPase-like protein. | 0.450 |
| Sde_0994 | Sde_1571 | Regulatory protein, LuxR. | Transcriptional regulator, XRE family. | 0.701 |
| Sde_0994 | Sde_2054 | Regulatory protein, LuxR. | Response regulator receiver. | 0.493 |
| Sde_0994 | Sde_3120 | Regulatory protein, LuxR. | ATP-binding region, ATPase-like protein. | 0.914 |
| Sde_0994 | Sde_3820 | Regulatory protein, LuxR. | Two component transcriptional regulator, LuxR family. | 0.632 |
| Sde_0994 | Sde_3821 | Regulatory protein, LuxR. | Histidine kinase, dimerisation and phosphoacceptor region. | 0.785 |
| Sde_1409 | Sde_0264 | ATP-binding region, ATPase-like protein. | ATP-binding region, ATPase-like protein. | 0.983 |
| Sde_1409 | Sde_0994 | ATP-binding region, ATPase-like protein. | Regulatory protein, LuxR. | 0.450 |
| Sde_1409 | Sde_1571 | ATP-binding region, ATPase-like protein. | Transcriptional regulator, XRE family. | 0.450 |
| Sde_1409 | Sde_2054 | ATP-binding region, ATPase-like protein. | Response regulator receiver. | 0.610 |
| Sde_1409 | Sde_3120 | ATP-binding region, ATPase-like protein. | ATP-binding region, ATPase-like protein. | 0.986 |
page 1 of 4