STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEOE_0060Alpha/beta superfamily hydrolase. (175 aa)    
Predicted Functional Partners:
OEOE_0103
Calcineurin-like phosphoesterase.
 
     0.722
OEOE_0497
Transcriptional regulator, MarR family.
  
    0.670
OEOE_1346
Transcriptional regulator.
  
    0.628
OEOE_1685
Transcriptional regulator.
  
     0.601
OEOE_0059
Hypothetical protein.
 
     0.565
OEOE_1764
Predicted permease.
  
    0.532
OEOE_0867
Hypothetical protein.
  
     0.468
OEOE_0061
Hypothetical protein.
  
     0.455
OEOE_0758
Transcriptional regulator.
  
     0.401
Your Current Organism:
Oenococcus oeni
NCBI taxonomy Id: 203123
Other names: O. oeni PSU-1, Oenococcus oeni PSU-1, Oenococcus oeni str. PSU-1, Oenococcus oeni strain PSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.