Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OEOE_0784 | OEOE_0941 | OEOE_0784 | OEOE_0941 | Predicted phosphoesterase or phosphohydrolase. | BS_ykrK family protein. | 0.648 |
OEOE_0784 | OEOE_0953 | OEOE_0784 | OEOE_0953 | Predicted phosphoesterase or phosphohydrolase. | Hypothetical protein. | 0.468 |
OEOE_0784 | OEOE_1794 | OEOE_0784 | OEOE_1794 | Predicted phosphoesterase or phosphohydrolase. | Universal stress protein UspA-like nucleotide-binding protein. | 0.547 |
OEOE_0941 | OEOE_0784 | OEOE_0941 | OEOE_0784 | BS_ykrK family protein. | Predicted phosphoesterase or phosphohydrolase. | 0.648 |
OEOE_0941 | OEOE_0942 | OEOE_0941 | OEOE_0942 | BS_ykrK family protein. | Hypothetical protein. | 0.737 |
OEOE_0941 | OEOE_0944 | OEOE_0941 | OEOE_0944 | BS_ykrK family protein. | ACT domain-containing protein; Belongs to the UPF0237 family. | 0.469 |
OEOE_0941 | OEOE_0945 | OEOE_0941 | OEOE_0945 | BS_ykrK family protein. | Hypothetical protein. | 0.458 |
OEOE_0941 | OEOE_0952 | OEOE_0941 | OEOE_0952 | BS_ykrK family protein. | L-glutamine synthetase. | 0.615 |
OEOE_0941 | OEOE_0953 | OEOE_0941 | OEOE_0953 | BS_ykrK family protein. | Hypothetical protein. | 0.468 |
OEOE_0941 | OEOE_1308 | OEOE_0941 | OEOE_1308 | BS_ykrK family protein. | DnaJ-class molecular chaperone with C-terminal Zn finger domain. | 0.649 |
OEOE_0941 | OEOE_1381 | OEOE_0941 | OEOE_1381 | BS_ykrK family protein. | Predicted membrane protein, hemolysin III related protein. | 0.529 |
OEOE_0941 | OEOE_1794 | OEOE_0941 | OEOE_1794 | BS_ykrK family protein. | Universal stress protein UspA-like nucleotide-binding protein. | 0.487 |
OEOE_0941 | folD | OEOE_0941 | OEOE_0943 | BS_ykrK family protein. | 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.499 |
OEOE_0942 | OEOE_0941 | OEOE_0942 | OEOE_0941 | Hypothetical protein. | BS_ykrK family protein. | 0.737 |
OEOE_0942 | OEOE_0944 | OEOE_0942 | OEOE_0944 | Hypothetical protein. | ACT domain-containing protein; Belongs to the UPF0237 family. | 0.511 |
OEOE_0942 | OEOE_0945 | OEOE_0942 | OEOE_0945 | Hypothetical protein. | Hypothetical protein. | 0.498 |
OEOE_0942 | folD | OEOE_0942 | OEOE_0943 | Hypothetical protein. | 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.518 |
OEOE_0944 | OEOE_0941 | OEOE_0944 | OEOE_0941 | ACT domain-containing protein; Belongs to the UPF0237 family. | BS_ykrK family protein. | 0.469 |
OEOE_0944 | OEOE_0942 | OEOE_0944 | OEOE_0942 | ACT domain-containing protein; Belongs to the UPF0237 family. | Hypothetical protein. | 0.511 |
OEOE_0944 | OEOE_0945 | OEOE_0944 | OEOE_0945 | ACT domain-containing protein; Belongs to the UPF0237 family. | Hypothetical protein. | 0.948 |
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