Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OEOE_0985 | OEOE_0986 | OEOE_0985 | OEOE_0986 | GatB/YqeY domain protein. | Phosphate starvation-inducible protein PhoH, predicted ATPase. | 0.800 |
OEOE_0985 | OEOE_0988 | OEOE_0985 | OEOE_0988 | GatB/YqeY domain protein. | Diacylglycerol kinase. | 0.800 |
OEOE_0985 | OEOE_0991 | OEOE_0985 | OEOE_0991 | GatB/YqeY domain protein. | Acetylornithine deacetylase. | 0.752 |
OEOE_0985 | era | OEOE_0985 | OEOE_0989 | GatB/YqeY domain protein. | GTPase; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.789 |
OEOE_0985 | recO | OEOE_0985 | OEOE_0990 | GatB/YqeY domain protein. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.781 |
OEOE_0985 | ybeY | OEOE_0985 | OEOE_0987 | GatB/YqeY domain protein. | Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.800 |
OEOE_0986 | OEOE_0985 | OEOE_0986 | OEOE_0985 | Phosphate starvation-inducible protein PhoH, predicted ATPase. | GatB/YqeY domain protein. | 0.800 |
OEOE_0986 | OEOE_0988 | OEOE_0986 | OEOE_0988 | Phosphate starvation-inducible protein PhoH, predicted ATPase. | Diacylglycerol kinase. | 0.824 |
OEOE_0986 | OEOE_0991 | OEOE_0986 | OEOE_0991 | Phosphate starvation-inducible protein PhoH, predicted ATPase. | Acetylornithine deacetylase. | 0.754 |
OEOE_0986 | era | OEOE_0986 | OEOE_0989 | Phosphate starvation-inducible protein PhoH, predicted ATPase. | GTPase; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.891 |
OEOE_0986 | recO | OEOE_0986 | OEOE_0990 | Phosphate starvation-inducible protein PhoH, predicted ATPase. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.901 |
OEOE_0986 | ybeY | OEOE_0986 | OEOE_0987 | Phosphate starvation-inducible protein PhoH, predicted ATPase. | Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.947 |
OEOE_0988 | OEOE_0985 | OEOE_0988 | OEOE_0985 | Diacylglycerol kinase. | GatB/YqeY domain protein. | 0.800 |
OEOE_0988 | OEOE_0986 | OEOE_0988 | OEOE_0986 | Diacylglycerol kinase. | Phosphate starvation-inducible protein PhoH, predicted ATPase. | 0.824 |
OEOE_0988 | OEOE_0991 | OEOE_0988 | OEOE_0991 | Diacylglycerol kinase. | Acetylornithine deacetylase. | 0.752 |
OEOE_0988 | era | OEOE_0988 | OEOE_0989 | Diacylglycerol kinase. | GTPase; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.860 |
OEOE_0988 | recO | OEOE_0988 | OEOE_0990 | Diacylglycerol kinase. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.855 |
OEOE_0988 | ybeY | OEOE_0988 | OEOE_0987 | Diacylglycerol kinase. | Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.923 |
OEOE_0991 | OEOE_0985 | OEOE_0991 | OEOE_0985 | Acetylornithine deacetylase. | GatB/YqeY domain protein. | 0.752 |
OEOE_0991 | OEOE_0986 | OEOE_0991 | OEOE_0986 | Acetylornithine deacetylase. | Phosphate starvation-inducible protein PhoH, predicted ATPase. | 0.754 |
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