STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEOE_1489ABC-type cobalt transport system, ATPase component. (458 aa)    
Predicted Functional Partners:
OEOE_1488
ABC-type cobalt transport system, permease component CbiQ-like transporter.
 
   0.976
OEOE_1491
ABC-type cobalt transport system, permease component.
 
    0.966
OEOE_0172
ABC-type cobalt transport system, permease component CbiQ-like transporter.
 
   0.901
OEOE_0174
Predicted membrane protein.
 
    0.858
OEOE_0175
Predicted membrane protein.
 
    0.858
OEOE_1490
Hypothetical protein.
       0.773
OEOE_0828
ABC-type cobalt transport system, permease component CbiQ-like transporter.
 
   0.708
ecfT
ABC-type cobalt transport system, permease component CbiQ-like transporter; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   0.686
OEOE_0625
ABC-type cobalt transport system, permease component CbiQ-like transporter.
   0.649
OEOE_1539
ABC-type cobalt transport system, permease component CbiQ-like transporter.
   0.613
Your Current Organism:
Oenococcus oeni
NCBI taxonomy Id: 203123
Other names: O. oeni PSU-1, Oenococcus oeni PSU-1, Oenococcus oeni str. PSU-1, Oenococcus oeni strain PSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.