STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEOE_1663DNA polymerase III, epsilon subunit-like 3'-5' exonuclease. (177 aa)    
Predicted Functional Partners:
dnaX
DNA polymerase III, gamma/tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
 0.980
OEOE_0002
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 0.979
OEOE_1000
DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family.
   
 0.976
OEOE_0965
DNA polymerase III, delta subunit.
    
 0.953
OEOE_1405
DNA polymerase III, delta prime subunit.
   
 0.924
polC
DNA polymerase III, alpha subunit (gram-positive type); Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
  
0.918
OEOE_1664
Predicted ATPase or kinase.
       0.800
OEOE_1667
Amino acid ABC transporter membrane protein, PAAT family; TC 3.A.1.3.-.
  
    0.753
OEOE_1666
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
       0.751
OEOE_1665
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
       0.743
Your Current Organism:
Oenococcus oeni
NCBI taxonomy Id: 203123
Other names: O. oeni PSU-1, Oenococcus oeni PSU-1, Oenococcus oeni str. PSU-1, Oenococcus oeni strain PSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.