STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_0041KEGG: ana:alr3811 hypothetical protein. (111 aa)    
Predicted Functional Partners:
Tery_3052
KEGG: ana:alr4016 hypothetical protein.
  
     0.770
Tery_2431
KEGG: ana:asr2994 hypothetical protein.
  
   
 0.768
Tery_4709
KEGG: ana:alr3414 hypothetical protein.
  
     0.766
ndhN
NADH dehydrogenase I subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.765
Tery_1550
PFAM: PRC-barrel; KEGG: syn:slr1220 hypothetical protein.
  
     0.764
Tery_1164
KEGG: ana:asr0654 hypothetical protein.
  
    0.763
Tery_4894
KEGG: ava:Ava_0784 hypothetical protein.
  
     0.763
Tery_3749
KEGG: syf:Synpcc7942_0562 hypothetical protein.
  
     0.762
Tery_3271
KEGG: ava:Ava_1733 hypothetical protein.
  
     0.760
Tery_4152
PFAM: glutaredoxin 2; KEGG: ava:Ava_1148 glutaredoxin 2.
  
     0.757
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.