STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_0147KEGG: tte:TTE2164 hypothetical protein. (355 aa)    
Predicted Functional Partners:
Tery_4393
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: rru:Rru_A1967 peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
     0.723
Tery_3935
KEGG: tde:TDE2520 hypothetical protein.
  
     0.722
Tery_2345
PFAM: glycoside hydrolase, family 57; KEGG: gvi:glr2625 hypothetical protein.
  
     0.669
Tery_1755
PFAM: polysaccharide pyruvyl transferase; KEGG: ava:Ava_3375 polysaccharide pyruvyl transferase.
  
     0.635
Tery_0146
PFAM: glycosyl transferase, group 1; KEGG: ava:Ava_4699 glycosyl transferase, group 1.
 
    0.623
Tery_0145
KEGG: ava:Ava_1930 hypothetical protein.
       0.559
Tery_0202
Putative transcriptional regulator; KEGG: rsp:RSP_4193 hypothetical protein.
  
     0.516
Tery_2417
KEGG: ana:all0661 adenylate cyclase; TIGRFAM: PAS sensor protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase PAS fold-3 PAS fold-4 PAS fold; SMART: PAS PAC motif; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
  
     0.498
Tery_1054
PFAM: S-layer-like region; KEGG: syf:Synpcc7942_0443 hypothetical protein.
  
     0.488
Tery_0845
PFAM: TENA/THI-4 protein; KEGG: wol:WD0880 coenzyme PQQ synthesis protein C, putative.
  
     0.468
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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