STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_0405PFAM: Hemolysin-type calcium-binding region; KEGG: bja:bll7673 hypothetical protein. (709 aa)    
Predicted Functional Partners:
Tery_0803
Hypothetical protein; KEGG: sil:SPO3673 type I secretion target repeat protein.
  
     0.775
Tery_0623
PFAM: secretion protein HlyD; KEGG: syf:Synpcc7942_1132 hypothetical protein.
  
    0.708
Tery_0100
PFAM: Na-Ca exchanger/integrin-beta4; SMART: Peptidase, metallopeptidases; KEGG: ava:Ava_4725 polymorphic membrane protein.
  
   0.604
Tery_1352
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; KEGG: ana:all7315 ABC transporter ATP-binding protein, hemolysin secretion protein; TIGRFAM: type I secretion system ATPase; PFAM: cyclic nucleotide-binding ABC transporter, transmembrane region ABC transporter related peptidase C39, bacteriocin processing; SMART: ATPase.
 
    0.590
Tery_2307
PFAM: Hemolysin-type calcium-binding region; KEGG: ana:alr7304 similar to hlyA.
  
     0.585
Tery_4419
KEGG: cvi:CV0464 hypothetical protein.
  
   0.548
Tery_4420
KEGG: syw:SYNW0985 hypothetical protein.
 
   0.505
Tery_0225
Bacteriocin-processing peptidase. Cysteine peptidase. MEROPS family C39; PFAM: cyclic nucleotide-binding ABC transporter, transmembrane region ABC transporter related peptidase C39, bacteriocin processing; SMART: ATPase; KEGG: ana:alr1927 putative multidrug resistance protein.
  
    0.472
Tery_0224
PFAM: secretion protein HlyD; KEGG: ava:Ava_4382 secretion protein HlyD.
  
    0.469
Tery_2038
FG-GAP; PFAM: Allergen V5/Tpx-1 related FG-GAP; KEGG: gvi:glr1060 hypothetical protein.
 
     0.457
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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