STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_0739Serine phosphatase; PFAM: Stage II sporulation E; SMART: Protein phosphatase 2C-like; KEGG: ana:all1758 hypothetical protein. (474 aa)    
Predicted Functional Partners:
Tery_0920
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ava:Ava_3722 anti-sigma-factor antagonist (STAS) domain protein.
 
 
 0.879
Tery_1167
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ava:Ava_4580 anti-sigma-factor antagonist (STAS) domain protein.
 
 
 0.870
Tery_5013
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: syn:slr1861 Rsb/Spo-like protein kinase.
 
 0.838
Tery_4980
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: ana:all0219 hypothetical protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL response regulator receiveR PAS fold-3 PAS fold; SMART: PAS.
  
  
 0.836
Tery_5017
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: syn:slr1856 phosphoprotein substrate of icfG gene cluster; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.809
Tery_3890
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ava:Ava_2070 anti-sigma-factor antagonist (STAS) domain protein.
 
 
 0.756
Tery_2243
KEGG: ava:Ava_3633 putative anti-sigma regulatory factor (Ser/Thr protein kinase).
 
 
 0.666
Tery_4818
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region, ATPase-like; KEGG: ana:all1702 anti-sigma B factor.
 
 
 0.630
Tery_0665
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: ana:alr3170 hypothetical protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL PAS fold-3 PAS fold-4 PAS fold; SMART: PAS PAC motif.
  
  
 0.621
Tery_4447
Multi-sensor hybrid histidine kinase; KEGG: ana:all2875 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein response regulator receiveR GAF ATP-binding region, ATPase-like histidine kinase A-like PAS fold-3 PAS fold; SMART: PAS PAC motif.
 
  
 0.618
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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