STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_0803Hypothetical protein; KEGG: sil:SPO3673 type I secretion target repeat protein. (634 aa)    
Predicted Functional Partners:
Tery_0405
PFAM: Hemolysin-type calcium-binding region; KEGG: bja:bll7673 hypothetical protein.
  
     0.775
Tery_1623
KEGG: bja:bll7673 hypothetical protein.
 
     0.775
Tery_2710
PFAM: Hemolysin-type calcium-binding region; KEGG: bja:bll7673 hypothetical protein.
 
     0.775
Tery_4191
PFAM: Hemolysin-type calcium-binding region; KEGG: sil:SPO1617 type I secretion target repeat protein.
  
     0.775
Tery_4644
PFAM: Allergen V5/Tpx-1 related Hemolysin-type calcium-binding region; KEGG: bja:bll7673 hypothetical protein.
 
     0.775
Tery_0419
PFAM: Hemolysin-type calcium-binding region; SMART: CHRD; KEGG: ana:alr0791 outer membrane secretion protein.
  
     0.774
Tery_0424
PFAM: Hemolysin-type calcium-binding region; SMART: CHRD; KEGG: ana:alr0791 outer membrane secretion protein.
  
     0.774
Tery_0591
FG-GAP; PFAM: Hemolysin-type calcium-binding region FG-GAP; KEGG: ava:Ava_0582 integrins alpha chain.
  
     0.774
Tery_1974
Peptidase-like; PFAM: Hemolysin-type calcium-binding region peptidase-like; KEGG: ava:Ava_1636 peptidase.
  
     0.774
Tery_2055
PFAM: Hemolysin-type calcium-binding region; SMART: CHRD; KEGG: ana:alr0791 outer membrane secretion protein.
  
     0.774
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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