STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_0807PFAM: pentapeptide repeat; KEGG: ana:all4152 hypothetical protein. (430 aa)    
Predicted Functional Partners:
Tery_2344
KEGG: ava:Ava_4888 hypothetical protein.
  
     0.772
Tery_2876
KEGG: syf:Synpcc7942_2395 hypothetical protein.
  
     0.763
Tery_1686
KEGG: ana:alr1356 hypothetical protein.
  
     0.750
Tery_2711
KEGG: ava:Ava_3395 hypothetical protein.
  
     0.744
Tery_3388
KEGG: ana:all2849 hypothetical protein.
  
     0.737
Tery_0436
KEGG: ana:all4581 hypothetical protein.
  
     0.728
Tery_1292
KEGG: ana:alr3874 hypothetical protein.
  
     0.726
Tery_1525
KEGG: ava:Ava_0742 hypothetical protein.
  
     0.723
Tery_0206
KEGG: ava:Ava_2889 hypothetical protein.
  
     0.719
Tery_1002
KEGG: ava:Ava_4316 hypothetical protein.
  
     0.706
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.