Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tery_0809KEGG: ava:Ava_0829 hypothetical protein. (66 aa)    
Predicted Functional Partners:
Tery_4488
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ava:Ava_3679 glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.703
cpcT2
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.688
Tery_3647
CpcD phycobilisome linker-like; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
     0.678
Tery_5073
ABC-type branched-chain amino acid transport systems periplasmic component-like; KEGG: ana:alr0344 serine/threonine kinase.
  
     0.667
Tery_5047
PFAM: HEAT domain containing protein PBS lyase HEAT-like repeat; KEGG: ava:Ava_2934 PBS lyase heat-like repeat.
  
     0.666
Tery_5048
TIGRFAM: phycocyanin, alpha subunit; PFAM: Phycobilisome protein; KEGG: tel:tlr1958 phycocyanin alpha subunit.
  
     0.662
Tery_4799
PFAM: Phycobilisome protein; KEGG: tel:tll1551 allophycocyanin-B.
  
     0.645
Tery_1892
PFAM: peptidase-like; KEGG: ava:Ava_1636 peptidase.
  
     0.626
Tery_3835
TIGRFAM: allophycocyanin, beta subunit; PFAM: Phycobilisome protein; KEGG: ava:Ava_0146 allophycocyanin, beta subunit.
  
     0.624
Tery_5049
TIGRFAM: phycocyanin, beta subunit; PFAM: Phycobilisome protein; KEGG: tel:tlr1957 phycocyanin beta subunit.
  
     0.612
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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