STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_1069TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sye:Syncc9902_2271 nitrate transporter. (502 aa)    
Predicted Functional Partners:
Tery_1070
Assimilatory nitrate reductase (ferredoxin) precursor; PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region molybdopterin oxidoreductase Fe4S4 region; KEGG: ava:Ava_4544 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.983
Tery_1068
Assimilatory nitrite reductase (ferredoxin) precursor; PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like nitrite and sulphite reductase 4Fe-4S region; KEGG: ana:alr0607 nitrite reductase.
 
  
 0.953
Tery_3325
uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase Uroporphyrinogen III synthase HEM4; KEGG: ana:alr3450 uroporphyrinogen III methylase; Belongs to the precorrin methyltransferase family.
  
  
 0.686
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: ava:Ava_1807 argininosuccinate lyase.
      
 0.618
argG
PFAM: argininosuccinate synthase ExsB; KEGG: ava:Ava_2068 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
      
 0.588
Tery_0466
PFAM: glutamine amidotransferase, class-II glutamate synthase, alpha subunit-like ferredoxin-dependent glutamate synthase glutamate synthase; KEGG: ava:Ava_1294 glutamine amidotransferase, class-II.
      
 0.576
Tery_2121
KEGG: syn:sll1150 hypothetical protein; Belongs to the BI1 family.
  
     0.562
Tery_2638
PFAM: conserved hypothetical protein 374; KEGG: pca:Pcar_0043 hypothetical protein.
  
     0.480
Tery_4369
PFAM: molybdopterin biosynthesis MoaE; KEGG: ava:Ava_4754 molybdopterin biosynthesis MoaE.
 
  
 0.477
Tery_4477
TIGRFAM: ammonium transporter; PFAM: Rh-like protein/ammonium transporter; KEGG: tel:tll1985 ammonium/methylammonium permease.
   
  
 0.462
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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