STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_1093KEGG: sma:SAV929 hypothetical protein. (1316 aa)    
Predicted Functional Partners:
Tery_1092
Hypothetical protein; KEGG: sma:SAV926 putative transcriptional activator SRCAP homolog.
 
     0.887
Tery_1090
KEGG: sma:SAV927 hypothetical protein.
 
     0.789
Tery_0702
KEGG: rru:Rru_A2993 hypothetical protein.
  
     0.734
Tery_0703
KEGG: gvi:glr3251 hypothetical protein.
  
     0.720
Tery_4180
PFAM: Peptidoglycan-binding domain 1; KEGG: mag:amb3986 phage-related lysozyme.
  
    0.681
Tery_1733
PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: sco:SCO1469 hypothetical protein.
  
     0.555
Tery_1091
PFAM: phage Tail Collar; KEGG: sty:STY1640 alternative bacteriophage tail fiber C-terminus.
  
     0.552
Tery_4262
KEGG: ava:Ava_3623 hypothetical protein.
  
     0.511
Tery_1841
Peptidase C14, caspase catalytic subunit p20; PFAM: Armadillo HEAT domain containing protein PBS lyase HEAT-like repeat peptidase C14, caspase catalytic subunit p20; KEGG: ana:alr1903 unknown protein.
  
     0.480
Tery_1814
KEGG: ana:alr0760 hypothetical protein.
  
     0.463
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.