STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_1186KEGG: cal:orf19.2629 coiled-coil protein necessary for protein transport from ER to Golgi Pfam: Uso1_p115_head Filament DUF164 Apolipoprotein Myosin_tail_1 MAD PROSITE: GLU_RICH LYS_RICH. (320 aa)    
Predicted Functional Partners:
Tery_1185
Hypothetical protein; KEGG: ehi:5.t00037 myosin heavy chain Pfam: Myosin_head DUF1409 DUF883 Filament DREPP Myosin_tail_1 PCRF PROSITE: GLU_RICH LYS_RICH.
      
0.693
Tery_1184
KEGG: ddi:DDB0189873 hypothetical protein.
      
0.415
Tery_1187
KEGG: syn:sll0446 hypothetical protein.
       0.403
Tery_1188
KEGG: syn:sll0446 hypothetical protein.
       0.403
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.