STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_1791TspO and MBR like proteins; PFAM: TspO/MBR-related protein; KEGG: ana:all3007 TspO and MBR related proteins. (249 aa)    
Predicted Functional Partners:
Tery_3678
PFAM: monooxygenase, FAD-binding; KEGG: ava:Ava_0867 monooxygenase, FAD-binding.
  
     0.540
Tery_4759
PFAM: monooxygenase, FAD-binding; KEGG: ava:Ava_0867 monooxygenase, FAD-binding.
  
     0.499
Tery_3680
PFAM: monooxygenase, FAD-binding; KEGG: ava:Ava_0867 monooxygenase, FAD-binding.
  
     0.493
Tery_2630
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ana:alr3252 hypothetical protein.
  
   0.468
Tery_3872
PFAM: PAP fibrillin; KEGG: ava:Ava_1969 PAP fibrillin.
  
     0.459
petG
Cytochrome b6/f complex, subunit 5; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.
  
     0.451
Tery_0826
PFAM: HEAT domain containing protein PBS lyase HEAT-like repeat; KEGG: ava:Ava_0996 PBS lyase heat-like repeat.
  
     0.450
Tery_4989
PFAM: NB-ARC; KEGG: ana:all1636 regulatory protein.
  
     0.439
Tery_2617
PFAM: GUN4-like; KEGG: ana:alr4949 serine/threonine kinase.
  
     0.430
Tery_3819
PFAM: beta-ketoacyl synthase acyl transferase region short-chain dehydrogenase/reductase SDR phosphopantetheine-binding Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like Methyltransferase type 11 Methyltransferase type 12; KEGG: ana:alr2680 polyketide synthase.
 
  
 0.410
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.