STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_1792TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: sru:SRU_1326 3'(2'),5'-bisphosphate nucleotidase. (323 aa)    
Predicted Functional Partners:
Tery_0108
KEGG: ava:Ava_3329 Ap4A phosphorylase II.
  
  
  0.931
Tery_2837
Phosphoadenylylsulfate reductase (thioredoxin); PFAM: phosphoadenosine phosphosulfate reductase; KEGG: syn:slr1791 phosphoadenosine phosphosulfate reductase; Belongs to the PAPS reductase family. CysH subfamily.
 
 
 0.931
sat
KEGG: ava:Ava_2382 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; Belongs to the sulfate adenylyltransferase family.
    
 0.927
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 
 0.923
cysC-2
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 
 0.923
Tery_4352
KEGG: ava:Ava_3136 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; Belongs to the NadC/ModD family.
      0.696
Tery_3446
TIGRFAM: putative delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase Proline dehydrogenase; KEGG: ana:alr0540 1-pyrroline-5 carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  
 0.648
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
 
 
 
 0.561
Tery_4756
PFAM: inositol monophosphatase; KEGG: ava:Ava_3333 inositol monophosphatase.
 
   
 0.469
Tery_4338
KEGG: syf:Synpcc7942_2278 hypothetical protein.
  
     0.447
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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