STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_1820KEGG: ana:asr0243 hypothetical protein. (102 aa)    
Predicted Functional Partners:
Tery_2565
KEGG: ana:alr2570 hypothetical protein.
  
     0.764
Tery_1819
TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; PFAM: phospholipid/glycerol acyltransferase; KEGG: ava:Ava_2731 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
       0.733
Tery_2564
PFAM: Penicillinase repressor; KEGG: ava:Ava_0498 transcriptional repressor, CopY family.
  
     0.675
Tery_2196
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: ana:alr3543 protease.
  
     0.651
Tery_3496
KEGG: syn:slr0645 hypothetical protein.
  
     0.627
Tery_0643
KEGG: ava:Ava_4219 hypothetical protein.
  
     0.593
Tery_4601
KEGG: ana:all1228 hypothetical protein.
  
     0.572
Tery_1600
KEGG: ana:all1164 hypothetical protein.
  
     0.561
Tery_0295
PFAM: peptidase M1, membrane alanine aminopeptidase PBS lyase HEAT-like repeat; KEGG: ava:Ava_0316 peptidase M1, membrane alanine aminopeptidase.
  
     0.557
Tery_3743
KEGG: syn:slr1557 hypothetical protein.
  
     0.552
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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