STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_1839KEGG: ava:Ava_4619 hypothetical protein. (190 aa)    
Predicted Functional Partners:
Tery_3155
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase response regulator receiveR GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: ana:all4963 adenylate cyclase carring two-component hybrid sensor and regulator domains.
 
 
 0.835
Tery_0785
KEGG: tel:tll1441 hypothetical protein.
  
     0.767
Tery_3403
KEGG: ava:Ava_1851 hypothetical protein.
  
     0.765
Tery_3546
KEGG: ava:Ava_5041 hypothetical protein.
  
     0.763
Tery_3208
Conserved hypothetical protein; KEGG: ana:alr3583 unknown protein.
  
     0.739
Tery_0595
KEGG: ava:Ava_0514 hypothetical protein.
  
     0.732
Tery_4447
Multi-sensor hybrid histidine kinase; KEGG: ana:all2875 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein response regulator receiveR GAF ATP-binding region, ATPase-like histidine kinase A-like PAS fold-3 PAS fold; SMART: PAS PAC motif.
 
 
 0.726
Tery_1607
KEGG: ana:alr1030 type IV pilus assembly protein PilO.
  
     0.720
Tery_3901
KEGG: ana:all5274 hypothetical protein.
  
     0.701
Tery_0612
KEGG: ava:Ava_4199 hypothetical protein.
  
     0.689
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.