STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_1908KEGG: ava:Ava_0174 hypothetical protein. (97 aa)    
Predicted Functional Partners:
Tery_4694
KEGG: syn:slr1568 hypothetical protein.
  
     0.774
Tery_2220
KEGG: ava:Ava_3220 hypothetical protein.
  
     0.764
Tery_2891
KEGG: ana:asr0064 hypothetical protein.
  
     0.758
Tery_5072
KEGG: ana:all0119 hypothetical protein.
  
     0.755
Tery_3541
KEGG: ava:Ava_3167 hypothetical protein.
  
     0.744
Tery_1159
KEGG: ana:all4790 hypothetical protein.
  
     0.740
Tery_0602
PFAM: ferrochelatase; KEGG: ava:Ava_2754 ferrochelatase; Belongs to the ferrochelatase family.
  
     0.730
Tery_2463
KEGG: ana:asl0639 hypothetical protein.
  
     0.728
Tery_3953
KEGG: ava:Ava_0202 hypothetical protein.
  
     0.727
Tery_2284
KEGG: ava:Ava_4201 hypothetical protein.
  
     0.726
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.