STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_1949PFAM: ferredoxin thioredoxin reductase, alpha chain; KEGG: ava:Ava_0401 ferredoxin thioredoxin reductase, alpha chain. (73 aa)    
Predicted Functional Partners:
Tery_1567
Ferredoxin thioredoxin reductase, beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
 
 
 0.963
Tery_0914
TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: gvi:gsr3623 ferredoxin.
    
   0.789
Tery_0915
TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: cyb:CYB_1598 ferredoxin, 2Fe-2S.
    
   0.789
Tery_0916
TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: gvi:gsr3623 ferredoxin.
    
   0.789
Tery_1134
KEGG: ava:Ava_3446 hypothetical protein.
  
     0.746
psbU
Photosystem II oxygen evolving complex protein PsbU; Stabilizes the structure of photosystem II oxygen-evolving complex (OEC), the ion environment of oxygen evolution and protects the OEC against heat-induced inactivation.
  
     0.734
Tery_0754
TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: ava:Ava_0981 ferredoxin (2Fe-2S).
    
   0.708
fdxH
TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: ana:all1430 heterocyst ferredoxin.
    
   0.708
Tery_4504
PFAM: ferredoxin; KEGG: tel:tll1529 probable ferredoxin.
    
   0.708
Tery_4539
TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: ava:Ava_0568 ferredoxin (2Fe-2S).
    
   0.708
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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