STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_2016Hypothetical protein; KEGG: cvi:CV3035 probable transposase. (104 aa)    
Predicted Functional Partners:
Tery_2015
Transposase, IS4 family; KEGG: ana:all2152 transposase.
     0.891
Tery_3139
Hypothetical protein; KEGG: ana:all2152 transposase.
 
     0.785
Tery_4414
Hypothetical protein; KEGG: ana:all2152 transposase.
 
     0.785
Tery_4438
Hypothetical protein; KEGG: ana:all2152 transposase.
 
     0.785
Tery_4561
Hypothetical protein; KEGG: ana:all2152 transposase.
 
     0.785
Tery_4292
Transposase; KEGG: ana:all2152 transposase.
 
     0.784
Tery_1696
Transposase, IS4 family; KEGG: ana:all2152 transposase.
 
     0.783
Tery_3091
Hypothetical protein; KEGG: ana:all2152 transposase.
 
     0.783
Tery_4296
Hypothetical protein; KEGG: ana:all2152 transposase.
 
     0.783
Tery_4889
Hypothetical protein; KEGG: ana:all2152 transposase.
 
     0.783
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.